MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA781460

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA781460

AttributeValue
SRA Study IDSRP347287
Disease(s)COVID-19 → COVID-19
Control → COVID-19 SARS-CoV-2 Negative
Isolation SourceNasopharyngeal Swab
BiomeUpper Respiratory Tract
Assay TypeWMS
InstrumentIllumina NovaSeq 6000
Library LayoutPAIRED
Year2022
Total Runs57
Processed Runs57
Variable Region
PMID35625719
CountrySweden

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 57

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