MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA820972

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA820972

AttributeValue
SRA Study IDSRP378933
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 2
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 1
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 3
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 4
Healthy → Healthy Smoker
Healthy → Healthy
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2022
Total Runs181
Processed Runs163
Variable Region
PMID
CountryAustralia

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 163

Go to Page:         

    
Go to Page:         

    


© 2023 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).