MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA825831

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA825831

AttributeValue
SRA Study IDSRP373330
Disease(s)Cystic Fibrosis → Cystic Fibrosis Exacerbation
Cystic Fibrosis → Cystic Fibrosis Treatment
Cystic Fibrosis → Cystic Fibrosis Follow Up
Isolation SourceSputum; BALF; OropharyngealSwab
BiomeLower Respiratory Tract; Upper Respiratory Tract
Assay TypeWMS
InstrumentNextSeq 500
Library LayoutPAIRED
Year2022
Total Runs117
Processed Runs117
Variable Region
PMID36698799
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 117

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