MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA841067

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA841067

AttributeValue
SRA Study IDSRP376391
Disease(s)COVID-19 → COVID-19 Coronary Care Unit (CCU) Workers
COVID-19 → COVID-19 Intensive Care Unit (ICU) Workers
COVID-19 → COVID-19 Operating Room (OR) Workers
COVID-19 → COVID-19 Respiratory Medicine Workers
Isolation SourceOropharyngealSwab
BiomeUpper Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIon Torrent S5
Library LayoutSINGLE
Year2023
Total Runs65
Processed Runs65
Variable RegionV2-V9
PMID36357898
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 65

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