MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA852674

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA852674

AttributeValue
SRA Study IDSRP403785
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD Stable
Chronic Obstructive Pulmonary Disease (COPD) → COPD Exacerbation
Healthy → Healthy Non Smoker
Healthy → Healthy Smoker
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina NovaSeq 6000
Library LayoutPAIRED
Year2022
Total Runs135
Processed Runs135
Variable Region
PMID35995842
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 135

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