BioProject ID: PRJNA859796

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA859796

Attribute	Value
SRA Study ID	SRP408011
Disease(s)	Pneumonia → Pneumonia
Isolation Source	BALF; Nasopharyngeal Aspirate; Sputum; Bronchial Brush; Pulmonary Biopsy; Bronchial Aspirate
Biome	Lower Respiratory Tract; Upper Respiratory Tract
Assay Type	Amplicon-16S
Instrument	Illumina MiSeq
Library Layout	PAIRED
Year	2023
Total Runs	71
Processed Runs	71
Variable Region
PMID
Country	Spain

Analyses

Taxonomic profile	BALF - Amplicon-16SNasopharyngeal Aspirate - Amplicon-16SSputum - Amplicon-16SBronchial Brush - Amplicon-16SPulmonary Biopsy - Amplicon-16SBronchial Aspirate - Amplicon-16S
Discriminant analysis	BALF - Amplicon-16SNasopharyngeal Aspirate - Amplicon-16SSputum - Amplicon-16SBronchial Brush - Amplicon-16SPulmonary Biopsy - Amplicon-16SBronchial Aspirate - Amplicon-16S
Microbial co-occurence analysis	BALF - Amplicon-16SNasopharyngeal Aspirate - Amplicon-16SSputum - Amplicon-16SBronchial Brush - Amplicon-16SPulmonary Biopsy - Amplicon-16SBronchial Aspirate - Amplicon-16S

Download

Biom file	Download - Amplicon-16S

Summary of runs

Total number of runs found in the database for this BioProject ID = 71

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