MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA896341

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA896341

AttributeValue
SRA Study IDSRP405563
Disease(s)COVID-19 → COVID-19 Severe
COVID-19 → COVID-19 Asymptomatic
COVID-19 → COVID-19 Mild
COVID-19 → COVID-19 Deceased
Control → COVID-19 SARS-CoV-2 Negative
Isolation SourceSaliva
BiomeOral
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2023
Total Runs282
Processed Runs282
Variable RegionV1-V3
PMID37310423
CountryMexico

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 282

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