MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA906201

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA906201

AttributeValue
SRA Study IDSRP410329
Disease(s)Lung Cancer → Adenocarcinoma
Healthy → Healthy
Isolation SourceBALF; Stool
Body siteLower Respiratory Tract; Gut
Assay TypeAmplicon-16S; WMS
InstrumentIllumina NovaSeq 6000
Library LayoutPAIRED
Year2023
Processed Runs256
Variable RegionV3-V4; NA
PMID36985120
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis
N.B.- No analysis is possible for BALF-WMS as no data is available in this bioproject. Discriminant analysis can not be performed for BALF (Amplicon-16S) because there is only one subgroup for this isolation source in this BioProject.

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 256

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