MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA934153

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA934153

AttributeValue
SRA Study IDSRP422559
Disease(s)COVID-19 → COVID-19 Moderate
COVID-19 → COVID-19 Severe/Critical
COVID-19 → COVID-19 Asymptomic/Mild
Healthy → Healthy
Control → Non COVID-19 ICU
Isolation SourceNasopharyngeal Swab and Throat Swabs (NPSTSs)
BiomeUpper Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2023
Total Runs314
Processed Runs314
Variable RegionV3-V4
PMID37469595
CountryHong Kong

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 314

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