BioProject ID: PRJNA944199

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA944199

Attribute	Value
SRA Study ID	SRP427873
Disease(s)	Chronic Obstructive Pulmonary Disease (COPD) → COPD Frequent Exacerberator Chronic Obstructive Pulmonary Disease (COPD) → COPD Infrequent Exacerberator
Isolation Source	Sputum; Nasal Swab; Oral Wash
Biome	Nasal; Oral; Lower Respiratory Tract
Assay Type	Amplicon-16S
Instrument	Illumina MiSeq
Library Layout	PAIRED
Year	2024
Total Runs	545
Processed Runs	496
Variable Region	V4
PMID	38333651
Country	USA

Analyses

Taxonomic profile	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOral Wash - Amplicon-16S
Discriminant analysis	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOral Wash - Amplicon-16S
Multivariate association analysis	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOral Wash - Amplicon-16S
Microbial co-occurence analysis	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOral Wash - Amplicon-16S

Download

Biom file	Download - Amplicon-16S

Summary of runs

Total number of runs found in the database for this BioProject ID = 496

Go to Page:    Go

First   Prev

Next   Last

Go to Page:    Go

First   Prev

Next   Last

---

© 2023 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).