MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA999361

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA999361

AttributeValue
SRA Study IDSRP453424
Disease(s)Cystic Fibrosis → Cystic Fibrosis LowCF
Cystic Fibrosis → Cystic Fibrosis MedCF
Cystic Fibrosis → Cystic Fibrosis MiPro
Control → Non Cystic Fibrosis LowCF
Control → Non Cystic Fibrosis MedCF
Control → Non Cystic Fibrosis MiPro
Isolation SourceStool; Colonoscopic Sample
BiomeGut; Large Intestine
Assay TypeAmplicon-16S
InstrumentNextSeq 2000
Library LayoutPAIRED
Year2023
Total Runs352
Processed Runs352
Variable RegionV3-V4
PMID38169295
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 352

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