LDA - MDPD

Discriminant analysis - PRJNA874064 | Amplicon-16S | Stool

Method

P-value (only for LEfSe)

Filter threshold

Taxa level

Cut-off value

Analysis parameters: Method = "edgeR (with FDR p-value adjustment)" | Filter threshold = 0.0001 | Taxa level = "Genus" | Cut-off value = 2

N.B. - 1) To view all the differential markers, please hover on the bars of the plot or download the data using the "Download data" button. located at the top of the page 2) A cutoff of log₁₀ (LDA score) ≥ 2 was used to determine the differential markers. 3) All differential markers in the LDA plot were found to be statistically significant. 4) The statistical significance cutoff used was: p-value < 0.01 (Kruskal-Wallis test). 5) To check the p-values for each differential marker, please download the data using the "Download data" button. 6) The downloaded data shows Kruskal-Wallis p-value. 7) The LDA plot can be downloaded as a SVG image by clicking on the "Export as SVG" button in the menubar located at the top right corner of the plot.