• Home
  • Search lncRNA
    • Transcripts
    • Expression
  • Browse
  • Download
  • Help
  • Contact

 

 

 

 

 

Welcome to LncRBase

LncRBase is a comprehensive database for long noncoding RNA (lncRNA) in Human and Mouse. With a total of 216562 lncRNA transcript entries,the database hosts information on basic lncRNA transcript features, with additional details on genomic location, overlapping small noncoding RNAs, associated Repeat Elements, associated imprinted genes, and lncRNA promoter information. Users can also search for microarray probes mapped to specific lncRNAs and associated disease information as well as search for lncRNA expression in a wide range of tissues.


LncRBase is freely accessible and allows users to search the dataset based on different search criteria. One can search by:
• lncRNA accession ID
• lncRNA gene symbol
• lncRNA associated disease type
• lncRNA subtype and coding potential
• lncRNA associated with small ncRNA
• lncRNA expression in different tissues

New version release

LncRBase V.2  

 

LncRNAs are noncoding transcripts longer than 200 nucleotides.They are actively transcribed from the cell from different genomic locations as shown below

LncRNAs are involved in multiple cellular regulatory processes, ranging from X chromosome inactivation, genomic imprinting and chromatin modification, to telomere elongation, transcriptional activation and nuclear trafficking.

 

LncRNAs are poorly conserved between species and show tissue-specific expression pattern.
LncRNAs play a role in the development and pathophysiology of disease. LncRNAs are expressed in various types of cancer including leukemia, breast cancer, hepatocellular carcinoma, colon cancer, and prostate cancer.



 

 


News

22nd September 2016 LncRBase updated

  • Statistics

    LncRBase contains

    133,361 human lncRNA entries

    83,201 mouse lncRNA entries

  • Acknowledgement

    Ensembl Database

    UCSC Genome Browser database

    Human Body Map lincRNAs

    NONCODE v3

    H-InvDB Annotated Human Gene Database

    lncrnadb

    • Ghosh Lab

      About

       

 

Best viewed in Mozilla Firefox and Google Chrome Browser
Screen resolution 1366 X 768 !

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 












|Bose Institute | Bioinformatics Centre | Ghosh Lab | Contact |

 

 

Version 1.0 

© Bose Institute